Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015911969.1_cds_XP_016461947.1_55220
CDS Infomation	[gene=LOC107785213] [db_xref=GeneID:107785213] [protein=E3 ubiquitin-protein ligase UPL4-like isoform X2] [protein_id=XP_016461947.1] [location=complement(join(6239..6304,6404..6487,6603..6731,6815..6883,6973..7053,7691..7795,7878..8108,8185..9411,9635..9730,9845..10961,11050..11168,11258..11410,15075..15236,15336..15494,15590..15706,15804..15914,16023..16619))] [gbkey=CDS]
Sequence	ATGGGAAACCGGGGGCAGAAAAGAACTGAAACTGTTGATGAACTGCCTGCCGATAAGCGA GCCTGTAGCTCCACGGAATTCAGGCCAAGTACTTCTAATTCAGTGGTTCATACTACAATG AGTTCTATACACGAAAGCAACAATGGCGATGTGGACACATCATCATCAAGTTCAGGGTCA AGTGAAGGTGGAAAGGACTCTGCTTACGGATCTTGTGAATCTGATAATAGCTTCAGGGAC TATTACAGGCGGCAATCGCTGGACAATCAGGGCAAATTCAAAGGAATTTTGTCAAGTTTG AGCAAGGAATTATCTGACGAATCAGCACTGTTGGCTGCTCTTACTGAGCTATGTGAATTG TTATCTTTTTCCCCTGATAGTTCGATTTCAAACTTAATGGCAGATTCATTTTCTCCCATT CTTGTAAGATTGGCTAGACATGAGAGCAATCCTGATATAATGCTATTAGCTATCAGGGCA ATGACTTATTTGTGTGAAGGTCATCCTCGTTCTTCGGCCTACCTAGTTAGACATGATGCA GTTCCTGCCCTTTGTCAAAGGTTAATGGCCATTGAGTACTTGGATGTGGCTGAACAGTGT TTGCAAGCACTGGAGAAAATTTCACATGACCAGCCGATTGTTTGTTTGCAATCTGGGGCT ATCATGGCCATTCTAAGTTATATTGATTTCTTTTCGACAAGTGTGCAGAGAAAGGCACTC TCAACTGTAGTAAATATTTGTAAAAAGCTTCCCTCTGAATGTCCGTCACCTTTGATGGAT GCAGTTCCCATTTTGTGTAATCTTCTTCTATACGAGGATAGACAGCTTGTTGAGAGTGTA GCCACTTGCTTAATTAGAATAGTGGAGCAAGTATGTCGCTCTTCCGATATGCTGGATGAA CTATGTAAACACGGTCTGGTTCAGCAAGCCACACATCTCATACAGTTGAATGGTCGAACA ACAGTTTGCCAATCAGTTTACGTTGGTTTAATTGGGTTACTTGTCAAACTGGCTGCTGGA TCTATTGTGGCCGTCAGGACTCTCTTTGAACTTAACATCAGCCGCATATCAAAGGACATT TTATCCACTTGTGACTTCTCACATGGGGGGCCTTCTACTCTGACGGTTGATGGGCACTAT AATCAGGTAGACGAAGTTCTCAAGTTGTTAAACGAACTTCTTCCTCCCATATCCAGAGAG CAGAATATCCAACTAGCTGCAGACAAAGAACACTTCCTCATCAATCACCCTGATCTTCTG CAGAAATTTGGCTTTGATTTATTTCCTGTGTTAATCCAGGTGGTCAGTTCTGGTGTAAAT TTATATGCTTGTTACAGCTGTCTATCTGTTATCAATAAGTTAGTTTATTTCAGCAAATCT GACATGCTTGAATTTCTTCAAAATACTAATATTTCAAGCTTCTTAGCTGGAGTTTTTACT CGCAACGATCCTCATGTTCTGATACTAGCCCTTCAGATTGTTGATAAGCTTCTAGAGAAG CTCTCTCATGTTTTCTTGAACTCATTTGTAAAGGAAGGTGTTCTCTTTGCTGTTGATGCA CTTCTTTCTCCGGAAAAATGTTCGCAGTTTCTATTTTCAGATGAAACCTGCCAAGGATCA GTACCATGTGCTGCAGTAAAATGTCTCTGTTTTGCTTCTGAGTCTCCAACAGGACCCGAA GCAAAGACCTGCAAGATAGAGAAAGAGACTCTTCAAAATCTTGCTAGGCATATCAGGACC AATTACTTTGCAACAGACTCAATGAATCCTGATTTAGGAATAACCAATGTTCTACAGAAG CTGAAGACTCTCTCTTCTGCATTAACTGATCTGGTCCACAAAGCTAGTAGCAGCATTGCT CCTCTTCAAGAGAAAGAAGACTTGTACCCTGTTTTGCATCAAATTATGTCAGAGTTAAAT GGAAATGATGCCATTTCCACGTTTGAGTTCATTGAAAGTGGAGTTGTAAAGTCTCTAGTG AATTACCTTTCCAATGGCCGATACTTGGGACAAAAGGTAGATGGTGATGGTTCAGTAGAT CAGCTGTACATTGTAGAAAAGAGATTTGAGCTGTTTGGTAGATTACTTTTGTATAACTCA GTCCCTCCTCTGGAGGACTCCACCTTTCTTGCACTGATAAAGAGATTGCATAGTGCACTT TCCTCAGTGGAAAACTTCCCAGTCATCTTGAGTCATGCATCTAAGCTACGAAACTCGTAT GCTACTGTCCCATATGGGCGTTGTACTTCATATCCTTGTCTGAAGGTCCAGTTTGTGAAG GGAGACGGGGAGTCTTCACTTGGAGATTATACAGAGTGTGTTGTGAATGTAGATCCTTTT TCGCCTTTGGAAACAATTGAGGGATACTTGTGGCCAAAAGTGAGTAGAAGGAAAAGTGAG AAGTTGAAACCTCCCACTCTGGCTACGGAGGATGAGTCATCGTCTCGTTCATCACAAGAT GTAAGCACGTCTCAAGGCAAAAGTCCAGGACCCATGGAATTGGACACCACATCCACCAAT GCCCATGAAACGCAGGAGGTGAAGAGTAACTTACAACTATCTGTTGAAGCGGAAAGTATG GACATAGAAAAAACAAAGAGCGATTCAATGGATATTTCAAATATTAATGCATCTTTGGAG AAAGGAAAACTTTGTTCGTCTGAAGATGATAGTAGCACAAGTTTAGGGTGTACTGGATGT TCTGATGATGAAGATGTTGCACCTAAATTGATATTCTACTTGGAGGGACAGCAGTTGAAC CAGAAGTTAACCCTATATCAAACTGTACTCCACCAGCAGATTAAAGCAGGGAATGACATC ATTACTAATTCAAGCATGTGGAGTCAAGTACACAGGGTGACCTACAGAAGATGTGTGAGA CATAAACCAGGATGTGCTCAGAGTTGCAAACACGTTGTAGATTCTACTCCATCTGGGAAA CCTATAATGTGGTGGCAGTACACCCCATTTTTCTCTAGCATGTTTAGCTGCGAAATGGTT GATCTTGAGAAATCAAGTCCAACTTATGAAATCTTATTTCTTCTGAAAAGCTTGGAAGGC ATGAACAGGTTCAGTTTTCATCTCATGTCTCATATAAAAATATATGCTTTTGCAGAAGGG AAGACCACCGATTTTAGTGATATAAAGGTCACAAATTCTGATCTCCCTCAGAATGAATTT GCGAACTCTAAATTGACAGAGAAACTAGAACTGCAAATGAGGAATCCTTTTTCTGTTTCC ATAGGTGGCATGCCACCTTGGTGTGGACAGTTGGTTAATTCATGCCCCTTTTTGTTTGGT TTCGAGGCAAGATGCAAGTATTTCCGCCTGGCTGCATTTGGTCAACCGCCAATCCATCCT GAACCGTCATCTCATAATACGGCAGGGGGTATGAGCGGTAGGCATCAAAACAATGGTGGC CTTCGCCGGAAAAAAATCTTAGTTCATCGAAATAGAATTTTGGATTCTGCAACACAGATG ATGGACCTCCATGCCGATCAGAAGGTTGTCATTGAGGTGGAATATAGTGATGAGGTTGGT ACTGGTCTTGGCCCAACCTTGGAATTTTTTACCTTGGTCGGTCATGAGTTCCAGAAGATT GGGCTAGGGATGTGGAGAGGTGATAGCATGGCTAGTGGAACCATGAGTGTAGAGCAGGAA TCTGGAATGCTCTTTTCTTCTTTTGGTCTCTTCCCTCGCCCATGGTCACCTTTATCCCGT TCGTTAAGTGGCCTAGAGTTCTCTGAAGTGCTGAAAAAGTTTGGGCTTCTGGGCCAGATA GTTGCAAAGGCTCTCCAAGATGGCAGGGTTTTGGATCTTCCTTTATCCAAAGCATTTTAC AAACTTGTTCTTGGGAGGGAACTCACGGTATATGACATCCAGTCATTTGAACCCGAACTT GGTAGGGCTCTCCTAGAATTTCAGGCTCTTGTTGAAAGAAAAAGACATCTGGAATCACTA TCTGAGGGAAAACCATCGTTAGACCTTGAACTTAATTTCGGGAATACGAAAATTGATGAT CTTTACCTTGACTATACTCTTCCTGGCTATCCAGATTATGTCTTTAATTCTGCATCCGAT GCAAAAATGGTTGACATGTCTAACTTAGAGGAATATGTTTCACTCATTGTGGATGCTTCT TTAAATTCTGGGATATCAAGGCAAATTGGAGCATTCAAGTCGGGCTTTGATCAGGTTTTC CCCATCAAACATCTTCAAGTATTCACAGAGGATGAATTAGAGCGACTGTTGTGTGGAGAG TGTGGATTTTGGAACTCCAATGAGCTTCTGGATCACATCAAGTTTGATCATGGGTACACT GCTAGCAGTCCTCCAGTTGTAAATTTACTCGAAATTATGAGGGAGTTTGACAGCAAACAA CAGAGAGCATTCCTGCAGTTTGTGACTGGTGCACCTAGACTGCCTCCAGGGGGTCTGGCA TCTCTAAGCCCAAAGTTAACAATTGTTCGGAAGACTTGCAGCGGTTGGGTTGACGCTGAC CTGCCTAGTGTGATGACATGTGCCAATTATCTGAAGCTACCACCTTACTCTTCAAAAGGG AAAATGAAGGAAAAACTGTTATATGCCATAACTGAAGGACAGGGCTCATTCTACCTTTCA TAG

Peptide Sequence

PEP ID	XP_016461947.1
PEP Infomation	PREDICTED: E3 ubiquitin-protein ligase UPL4-like isoform X2 [Nicotiana tabacum]
Sequence	MGNRGQKRTETVDELPADKRACSSTEFRPSTSNSVVHTTMSSIHESNNGDVDTSSSSSGS SEGGKDSAYGSCESDNSFRDYYRRQSLDNQGKFKGILSSLSKELSDESALLAALTELCEL LSFSPDSSISNLMADSFSPILVRLARHESNPDIMLLAIRAMTYLCEGHPRSSAYLVRHDA VPALCQRLMAIEYLDVAEQCLQALEKISHDQPIVCLQSGAIMAILSYIDFFSTSVQRKAL STVVNICKKLPSECPSPLMDAVPILCNLLLYEDRQLVESVATCLIRIVEQVCRSSDMLDE LCKHGLVQQATHLIQLNGRTTVCQSVYVGLIGLLVKLAAGSIVAVRTLFELNISRISKDI LSTCDFSHGGPSTLTVDGHYNQVDEVLKLLNELLPPISREQNIQLAADKEHFLINHPDLL QKFGFDLFPVLIQVVSSGVNLYACYSCLSVINKLVYFSKSDMLEFLQNTNISSFLAGVFT RNDPHVLILALQIVDKLLEKLSHVFLNSFVKEGVLFAVDALLSPEKCSQFLFSDETCQGS VPCAAVKCLCFASESPTGPEAKTCKIEKETLQNLARHIRTNYFATDSMNPDLGITNVLQK LKTLSSALTDLVHKASSSIAPLQEKEDLYPVLHQIMSELNGNDAISTFEFIESGVVKSLV NYLSNGRYLGQKVDGDGSVDQLYIVEKRFELFGRLLLYNSVPPLEDSTFLALIKRLHSAL SSVENFPVILSHASKLRNSYATVPYGRCTSYPCLKVQFVKGDGESSLGDYTECVVNVDPF SPLETIEGYLWPKVSRRKSEKLKPPTLATEDESSSRSSQDVSTSQGKSPGPMELDTTSTN AHETQEVKSNLQLSVEAESMDIEKTKSDSMDISNINASLEKGKLCSSEDDSSTSLGCTGC SDDEDVAPKLIFYLEGQQLNQKLTLYQTVLHQQIKAGNDIITNSSMWSQVHRVTYRRCVR HKPGCAQSCKHVVDSTPSGKPIMWWQYTPFFSSMFSCEMVDLEKSSPTYEILFLLKSLEG MNRFSFHLMSHIKIYAFAEGKTTDFSDIKVTNSDLPQNEFANSKLTEKLELQMRNPFSVS IGGMPPWCGQLVNSCPFLFGFEARCKYFRLAAFGQPPIHPEPSSHNTAGGMSGRHQNNGG LRRKKILVHRNRILDSATQMMDLHADQKVVIEVEYSDEVGTGLGPTLEFFTLVGHEFQKI GLGMWRGDSMASGTMSVEQESGMLFSSFGLFPRPWSPLSRSLSGLEFSEVLKKFGLLGQI VAKALQDGRVLDLPLSKAFYKLVLGRELTVYDIQSFEPELGRALLEFQALVERKRHLESL SEGKPSLDLELNFGNTKIDDLYLDYTLPGYPDYVFNSASDAKMVDMSNLEEYVSLIVDAS LNSGISRQIGAFKSGFDQVFPIKHLQVFTEDELERLLCGECGFWNSNELLDHIKFDHGYT ASSPPVVNLLEIMREFDSKQQRAFLQFVTGAPRLPPGGLASLSPKLTIVRKTCSGWVDAD LPSVMTCANYLKLPPYSSKGKMKEKLLYAITEGQGSFYLS

Transcript Sequence

Gene sequence data has not been registered.